Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI534_15925 | Not Available | Negative | 3360401 - 3361246 | 30820.9 |
| hypothetical protein | DI534_15930 | Not Available | Negative | 3361294 - 3362511 | 44400.8 |
| hypothetical protein | DI534_15935 | Not Available | Negative | 3362520 - 3363461 | 34282.2 |
| hypothetical protein | DI534_15940 | Not Available | Negative | 3363589 - 3364533 | 34440.3 |
| hypothetical protein | DI534_15945 | Not Available | Negative | 3364662 - 3365663 | 36097.6 |
| hypothetical protein | DI534_15950 | Not Available | Negative | 3365785 - 3366786 | 35617.9 |
| hypothetical protein | DI534_15955 | Not Available | Negative | 3366904 - 3368310 | 51272.6 |
| hypothetical protein | DI534_15960 | Not Available | Negative | 3368321 - 3368779 | 17464.5 |
| hypothetical protein | DI534_15970 | Not Available | Positive | 3369766 - 3370188 | 14887.7 |
| hypothetical protein | DI534_15975 | Not Available | Positive | 3370332 - 3371159 | 30368.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
