Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arsr family transcriptional regulator | DI534_15875 | Not Available | Positive | 3352601 - 3352969 | 12544.0 |
| arsr family transcriptional regulator | DI534_15880 | Not Available | Positive | 3352956 - 3353477 | 19081.5 |
| arsenical-resistance protein | DI534_15885 | Not Available | Positive | 3353498 - 3354565 | 37755.5 |
| arsenate reductase (glutaredoxin) | DI534_15890 | Not Available | Positive | 3354576 - 3354986 | 14578.7 |
| hypothetical protein | DI534_15895 | Not Available | Positive | 3355161 - 3356075 | 31767.8 |
| permease | DI534_15900 | Not Available | Negative | 3356085 - 3356900 | 27755.1 |
| transcriptional regulator | DI534_15905 | Not Available | Positive | 3357050 - 3357412 | 12692.3 |
| arsenical resistance protein arsh | DI534_15910 | Not Available | Positive | 3357376 - 3358119 | 27850.6 |
| mfs transporter | DI534_15915 | Not Available | Positive | 3358123 - 3358468 | 11338.0 |
| hypothetical protein | DI534_15920 | Not Available | Positive | 3358587 - 3360329 | 65852.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
