Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cusa/czca family heavy metal efflux rnd transporter | DI534_15820 | Not Available | Negative | 3338170 - 3341331 | 111260.0 |
| multidrug transporter | DI534_15825 | Not Available | Negative | 3341331 - 3342440 | 39807.8 |
| transporter | DI534_15830 | Not Available | Positive | 3342686 - 3343618 | 32166.9 |
| merr family transcriptional regulator | DI534_15835 | Not Available | Negative | 3343780 - 3344205 | 16189.4 |
| cusa/czca family heavy metal efflux rnd transporter | DI534_15845 | Not Available | Negative | 3346206 - 3349355 | 112867.0 |
| efflux transporter periplasmic adaptor subunit | DI534_15850 | Not Available | Negative | 3349352 - 3350797 | 50070.6 |
| heavy metal rnd transporter | DI534_15855 | Not Available | Negative | 3350794 - 3351198 | 14306.5 |
| hypothetical protein | DI534_15860 | Not Available | Negative | 3351339 - 3351770 | 14812.4 |
| hypothetical protein | DI534_15865 | Not Available | Negative | 3351767 - 3352006 | 8739.55 |
| hypothetical protein | DI534_15870 | Not Available | Negative | 3352209 - 3352448 | 7700.43 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
