Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI534_01505 | Not Available | Positive | 314131 - 315012 | 32029.5 |
| heat-shock protein htpx | DI534_01510 | Not Available | Positive | 315074 - 315490 | 14855.9 |
| phosphatase | DI534_01515 | Not Available | Positive | 315487 - 316155 | 24198.6 |
| hypothetical protein | DI534_01520 | Not Available | Negative | 316134 - 316769 | 23682.9 |
| hypothetical protein | DI534_01525 | Not Available | Positive | 317096 - 318082 | 36118.8 |
| short-chain dehydrogenase | DI534_01530 | Not Available | Positive | 318146 - 319618 | 52717.8 |
| cupin domain-containing protein | DI534_01535 | Not Available | Negative | 319628 - 319939 | 11061.3 |
| transcriptional regulator | DI534_01540 | Not Available | Negative | 319936 - 320232 | 10756.8 |
| fad-binding protein | DI534_01545 | Not Available | Positive | 320316 - 321575 | 44820.2 |
| hypothetical protein | DI534_01550 | Not Available | Positive | 321593 - 321931 | 11857.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
