Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | DI534_15720 | Not Available | Negative | 3322334 - 3323149 | 29489.1 |
| histidine kinase | DI534_15725 | Not Available | Positive | 3323581 - 3324576 | 36642.1 |
| hypothetical protein | DI534_15730 | Not Available | Positive | 3324629 - 3325015 | 14165.0 |
| hypothetical protein | DI534_15735 | Not Available | Positive | 3325100 - 3325483 | 13764.1 |
| molybdopterin oxidoreductase | DI534_15740 | Not Available | Negative | 3325487 - 3326578 | 39895.9 |
| rna polymerase subunit sigma-70 | DI534_15745 | Not Available | Positive | 3326713 - 3327228 | 19277.0 |
| anti-sigma factor | DI534_15750 | Not Available | Positive | 3327225 - 3328001 | 26173.1 |
| oxidase | DI534_15755 | Not Available | Positive | 3328075 - 3329289 | 43476.2 |
| sulfite:cytochrome c oxidoreductase subunit b | DI534_15760 | Not Available | Positive | 3329301 - 3329603 | 10901.0 |
| dna starvation/stationary phase protection protein dps | DI534_15765 | Not Available | Negative | 3329840 - 3330394 | 19969.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
