Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| resolvase | DI534_15670 | Not Available | Positive | 3314862 - 3315449 | 21510.9 |
| xre family transcriptional regulator | DI534_15675 | Not Available | Negative | 3315430 - 3315678 | 8773.64 |
| hypothetical protein | DI534_15680 | Not Available | Negative | 3315675 - 3315887 | 7699.93 |
| hypothetical protein | DI534_15685 | Not Available | Negative | 3316154 - 3316525 | 13498.5 |
| plasmid mobilization relaxosome protein mobc | DI534_15690 | Not Available | Positive | 3316780 - 3317178 | 14531.2 |
| relaxase | DI534_15695 | Not Available | Positive | 3317175 - 3318911 | 62988.8 |
| hypothetical protein | DI534_15700 | Not Available | Positive | 3318927 - 3319769 | 30656.9 |
| duf4913 domain-containing protein | DI534_15705 | Not Available | Negative | 3319834 - 3320389 | 20587.8 |
| mfs transporter | DI534_15710 | Not Available | Positive | 3320390 - 3320829 | 14226.8 |
| hypothetical protein | DI534_15715 | Not Available | Positive | 3320980 - 3322005 | 37570.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
