Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ai-2e family transporter | DI534_15620 | Not Available | Negative | 3309691 - 3310818 | 38682.5 |
| hypothetical protein | DI534_15625 | Not Available | Negative | 3310815 - 3311069 | 9105.76 |
| qace family quaternary ammonium compound efflux smr transporter | DI534_15630 | Not Available | Negative | 3311087 - 3311407 | 11083.2 |
| qace family quaternary ammonium compound efflux smr transporter | DI534_15635 | Not Available | Negative | 3311407 - 3311754 | 11818.0 |
| tetr family transcriptional regulator | DI534_15640 | Not Available | Negative | 3311757 - 3312287 | 19391.4 |
| hypothetical protein | DI534_15645 | Not Available | Positive | 3312355 - 3313011 | 23424.6 |
| chemotaxis protein chey | DI534_15650 | Not Available | Positive | 3313119 - 3313301 | 7083.47 |
| hypothetical protein | DI534_15655 | Not Available | Positive | 3313464 - 3313706 | 8845.18 |
| cell filamentation protein fic | DI534_15660 | Not Available | Positive | 3313708 - 3314526 | 30184.0 |
| hypothetical protein | DI534_15665 | Not Available | Positive | 3314536 - 3314865 | 11890.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
