Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nrdh-redoxin | DI534_15570 | Not Available | Positive | 3305441 - 3305689 | 9258.93 |
| hypothetical protein | DI534_15575 | Not Available | Positive | 3305750 - 3306166 | 15246.6 |
| hypothetical protein | DI534_15580 | Not Available | Positive | 3306216 - 3306476 | 9694.55 |
| single-stranded dna-binding protein | DI534_15585 | Not Available | Positive | 3306524 - 3306907 | 13870.0 |
| hypothetical protein | DI534_15590 | Not Available | Positive | 3307166 - 3307477 | 10764.5 |
| cobalamin biosynthesis protein cobq | DI534_15595 | Not Available | Positive | 3307591 - 3308388 | 27824.1 |
| hypothetical protein | DI534_15600 | Not Available | Positive | 3308385 - 3308789 | 14027.6 |
| hypothetical protein | DI534_15605 | Not Available | Positive | 3308791 - 3309033 | 8909.27 |
| hypothetical protein | DI534_15610 | Not Available | Positive | 3309043 - 3309255 | 7900.41 |
| hypothetical protein | DI534_15615 | Not Available | Negative | 3309268 - 3309546 | 10238.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
