Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI534_15465 | Not Available | Negative | 3282952 - 3284739 | 63438.8 |
| flagellar motor protein | DI534_15470 | Not Available | Negative | 3284765 - 3285610 | 30877.7 |
| dna-binding response regulator | DI534_15475 | Not Available | Positive | 3285744 - 3286388 | 22442.4 |
| hybrid sensor histidine kinase/response regulator | DI534_15480 | Not Available | Negative | 3286396 - 3287354 | 34322.1 |
| duf4913 domain-containing protein | DI534_15485 | Not Available | Negative | 3287355 - 3287639 | 10049.5 |
| conjugal transfer protein | DI534_15490 | Not Available | Negative | 3287639 - 3289426 | 63300.8 |
| atp/gtp-binding protein | DI534_15495 | Not Available | Negative | 3289423 - 3291051 | 58459.4 |
| hypothetical protein | DI534_15500 | Not Available | Negative | 3291051 - 3292487 | 50662.5 |
| hypothetical protein | DI534_15510 | Not Available | Negative | 3294207 - 3294956 | 25835.0 |
| hypothetical protein | DI534_15515 | Not Available | Negative | 3294968 - 3295270 | 10084.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
