Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI534_15415 | Not Available | Positive | 3271701 - 3272084 | 13904.0 |
| hypothetical protein | DI534_15420 | Not Available | Positive | 3272081 - 3273856 | 64467.9 |
| hypothetical protein | DI534_15425 | Not Available | Negative | 3273867 - 3274094 | 8491.21 |
| is5/is1182 family transposase | DI534_15430 | Not Available | Negative | 3274633 - 3275712 | 40372.0 |
| hypothetical protein | DI534_15435 | Not Available | Positive | 3275940 - 3276845 | 33212.7 |
| hypothetical protein | DI534_15440 | Not Available | Positive | 3276859 - 3279693 | 100633.0 |
| hypothetical protein | DI534_15445 | Not Available | Negative | 3279713 - 3280147 | 16393.8 |
| hypothetical protein | DI534_15450 | Not Available | Positive | 3280596 - 3280811 | 7542.87 |
| hypothetical protein | DI534_15455 | Not Available | Positive | 3280893 - 3281408 | 18030.2 |
| hypothetical protein | DI534_15460 | Not Available | Negative | 3281531 - 3282544 | 35406.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
