Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI534_15365 | Not Available | Negative | 3258067 - 3259332 | 44460.7 |
| histidine kinase | DI534_15370 | Not Available | Negative | 3259392 - 3265646 | 229017.0 |
| radical sam protein | DI534_15375 | Not Available | Negative | 3265643 - 3266287 | 23381.9 |
| atpase | DI534_15380 | Not Available | Negative | 3266284 - 3268053 | 63412.2 |
| plasmid maintenance system killer | DI534_15385 | Not Available | Positive | 3268472 - 3268750 | 10450.5 |
| addiction module antidote protein, higa family | DI534_15390 | Not Available | Positive | 3268798 - 3269112 | 11306.8 |
| hypothetical protein | DI534_15395 | Not Available | Negative | 3269342 - 3269548 | 7983.53 |
| hypothetical protein | DI534_15400 | Not Available | Negative | 3269571 - 3270203 | 22848.4 |
| hypothetical protein | DI534_15405 | Not Available | Negative | 3270208 - 3270900 | 25194.4 |
| hypothetical protein | DI534_15410 | Not Available | Negative | 3270959 - 3271336 | 13745.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
