Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI534_15265 | Not Available | Negative | 3236618 - 3237553 | 35121.6 |
| hypothetical protein | DI534_15270 | Not Available | Positive | 3237698 - 3238429 | 27417.6 |
| transporter | DI534_15275 | Not Available | Negative | 3238630 - 3241704 | 108465.0 |
| efflux transporter periplasmic adaptor subunit | DI534_15280 | Not Available | Negative | 3241704 - 3242726 | 33821.5 |
| transporter | DI534_15285 | Not Available | Negative | 3242744 - 3244081 | 46845.2 |
| peptidase m4 | DI534_15290 | Not Available | Negative | 3244159 - 3244473 | 10754.8 |
| dna-binding response regulator | DI534_15295 | Not Available | Positive | 3244601 - 3245275 | 24601.9 |
| two-component sensor histidine kinase | DI534_15300 | Not Available | Positive | 3245265 - 3246659 | 50137.3 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | DI534_15305 | Not Available | Negative | 3246638 - 3247432 | 28213.2 |
| deda family protein | DI534_15310 | Not Available | Negative | 3247436 - 3248038 | 22060.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
