Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI534_01450 | Not Available | Positive | 306735 - 307523 | 29101.8 |
| hypothetical protein | DI534_01455 | Not Available | Negative | 307584 - 307838 | 9458.2 |
| hypothetical protein | DI534_01460 | Not Available | Negative | 307835 - 308263 | 16542.8 |
| heavy metal-responsive transcriptional regulator | DI534_01465 | Not Available | Negative | 308389 - 308778 | 14177.9 |
| mercury(ii) reductase | DI534_01470 | Not Available | Positive | 308857 - 310305 | 50105.1 |
| cadmium transporter | DI534_01475 | Not Available | Negative | 310372 - 310968 | 20654.7 |
| arsr family transcriptional regulator | DI534_01480 | Not Available | Negative | 310965 - 311324 | 12749.3 |
| aquaporin family protein | DI534_01490 | Not Available | Negative | 311657 - 312358 | 24072.9 |
| transcriptional regulator | DI534_01495 | Not Available | Negative | 312355 - 312708 | 12500.2 |
| flavoprotein | DI534_01500 | Not Available | Positive | 312793 - 314106 | 46676.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
