Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI534_15215 | Not Available | Negative | 3222837 - 3224087 | 44854.6 |
| dna polymerase iii subunit epsilon | DI534_15220 | Not Available | Positive | 3224928 - 3226013 | 40420.1 |
| hypothetical protein | DI534_15225 | Not Available | Negative | 3225996 - 3226790 | 28438.3 |
| dna-binding response regulator | DI534_15230 | Not Available | Negative | 3226787 - 3227464 | 24590.0 |
| hypothetical protein | DI534_15235 | Not Available | Negative | 3227566 - 3228459 | 33040.8 |
| two-component sensor histidine kinase | DI534_15240 | Not Available | Negative | 3228547 - 3229911 | 48804.4 |
| dna-binding response regulator | DI534_15245 | Not Available | Negative | 3229911 - 3230591 | 25099.3 |
| transporter | DI534_15250 | Not Available | Negative | 3230601 - 3231989 | 48451.6 |
| acriflavin resistance protein | DI534_15255 | Not Available | Negative | 3231986 - 3235174 | 113362.0 |
| membrane fusion protein mtrc | DI534_15260 | Not Available | Negative | 3235174 - 3236148 | 33355.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
