Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI534_15165 | Not Available | Positive | 3212221 - 3212724 | 18446.2 |
| hypothetical protein | DI534_15170 | Not Available | Positive | 3213137 - 3213850 | 26481.0 |
| hypothetical protein | DI534_15175 | Not Available | Negative | 3213921 - 3214688 | 28152.9 |
| hypothetical protein | DI534_15180 | Not Available | Negative | 3214748 - 3216721 | 72477.3 |
| hypothetical protein | DI534_15185 | Not Available | Negative | 3216721 - 3217680 | 34421.4 |
| hypothetical protein | DI534_15190 | Not Available | Negative | 3217677 - 3219851 | 80384.3 |
| hypothetical protein | DI534_15195 | Not Available | Negative | 3220172 - 3220996 | 30436.3 |
| hypothetical protein | DI534_15200 | Not Available | Negative | 3220993 - 3221211 | 7863.56 |
| hypothetical protein | DI534_15205 | Not Available | Negative | 3221278 - 3221535 | 9162.24 |
| hypothetical protein | DI534_15210 | Not Available | Positive | 3221656 - 3222840 | 43724.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
