Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI534_15015 | Not Available | Negative | 3183686 - 3184474 | 27137.7 |
| hypothetical protein | DI534_15020 | Not Available | Negative | 3184474 - 3184725 | 8677.51 |
| copper resistance protein copc | DI534_15025 | Not Available | Negative | 3185106 - 3186803 | 58028.6 |
| hypothetical protein | DI534_15030 | Not Available | Negative | 3186695 - 3187222 | 18667.4 |
| hypothetical protein | DI534_15035 | Not Available | Negative | 3187236 - 3187736 | 17311.8 |
| dj-1/pfpi family protein | DI534_15040 | Not Available | Negative | 3187773 - 3188615 | 29755.9 |
| tonb-dependent siderophore receptor | DI534_15045 | Not Available | Negative | 3188626 - 3190818 | 79658.5 |
| tonb-dependent receptor | DI534_15050 | Not Available | Negative | 3190824 - 3192998 | 78462.6 |
| tonb-dependent receptor | DI534_15055 | Not Available | Negative | 3193004 - 3195133 | 76994.4 |
| hypothetical protein | DI534_15060 | Not Available | Negative | 3195937 - 3196719 | 28674.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
