Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI534_14950 | Not Available | Positive | 3166528 - 3169794 | 116923.0 |
| hypothetical protein | DI534_14955 | Not Available | Negative | 3170927 - 3172735 | 66527.1 |
| hypothetical protein | DI534_14960 | Not Available | Negative | 3172735 - 3173856 | 41051.7 |
| hypothetical protein | DI534_14965 | Not Available | Negative | 3173832 - 3176048 | 83472.0 |
| hypothetical protein | DI534_14970 | Not Available | Negative | 3176048 - 3176740 | 25458.4 |
| hypothetical protein | DI534_14975 | Not Available | Negative | 3177535 - 3179484 | 69037.1 |
| hypothetical protein | DI534_14980 | Not Available | Negative | 3179511 - 3180140 | 22526.8 |
| transcriptional regulator | DI534_14985 | Not Available | Positive | 3180423 - 3180653 | 8406.07 |
| hydrolase tatd | DI534_15005 | Not Available | Negative | 3181660 - 3182421 | 28111.8 |
| hypothetical protein | DI534_15010 | Not Available | Negative | 3182418 - 3183689 | 45507.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
