Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI534_14900 | Not Available | Positive | 3153626 - 3154216 | 22279.3 |
| structural protein | DI534_14905 | Not Available | Positive | 3154403 - 3154840 | 16248.5 |
| hypothetical protein | DI534_14910 | Not Available | Positive | 3154852 - 3155199 | 12846.6 |
| terminase | DI534_14915 | Not Available | Positive | 3156118 - 3157656 | 58614.3 |
| hypothetical protein | DI534_14920 | Not Available | Positive | 3157658 - 3159193 | 56558.1 |
| hypothetical protein | DI534_14925 | Not Available | Negative | 3159851 - 3160111 | 9923.01 |
| hypothetical protein | DI534_14930 | Not Available | Positive | 3160282 - 3161352 | 38375.5 |
| hypothetical protein | DI534_14935 | Not Available | Positive | 3164046 - 3164495 | 16175.2 |
| hypothetical protein | DI534_14940 | Not Available | Positive | 3164508 - 3165686 | 41268.7 |
| hypothetical protein | DI534_14945 | Not Available | Positive | 3165786 - 3166175 | 14871.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
