Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| padr family transcriptional regulator | DI534_14790 | Not Available | Negative | 3105047 - 3105667 | 22497.4 |
| hypothetical protein | DI534_14795 | Not Available | Negative | 3105664 - 3106464 | 28030.2 |
| hypothetical protein | DI534_14800 | Not Available | Negative | 3106962 - 3107609 | 22539.7 |
| plp-dependent aminotransferase family protein | DI534_14805 | Not Available | Positive | 3107672 - 3109090 | 51071.7 |
| hydrogenase expression protein | DI534_14810 | Not Available | Positive | 3109247 - 3112357 | 106188.0 |
| hypothetical protein | DI534_14815 | Not Available | Negative | 3112726 - 3113772 | 36087.6 |
| hypothetical protein | DI534_14820 | Not Available | Positive | 3114182 - 3114753 | 21717.8 |
| hypothetical protein | DI534_14825 | Not Available | Positive | 3114809 - 3116479 | 59014.8 |
| duf1768 domain-containing protein | DI534_14830 | Not Available | Negative | 3120599 - 3121075 | 18342.3 |
| hypothetical protein | DI534_14835 | Not Available | Negative | 3123121 - 3123768 | 23976.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
