Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylformylglycinamidine cyclo-ligase | DI534_14740 | Not Available | Positive | 3093011 - 3094141 | 38117.2 |
| duf3073 domain-containing protein | DI534_14745 | Not Available | Negative | 3094220 - 3094429 | 7922.89 |
| pyridine nucleotide-disulfide oxidoreductase | DI534_14750 | Not Available | Positive | 3094587 - 3095687 | 39593.8 |
| amylo-alpha-1,6-glucosidase | DI534_14755 | Not Available | Negative | 3095668 - 3097557 | 67916.0 |
| laci family transcriptional regulator | DI534_14760 | Not Available | Positive | 3097716 - 3098816 | 39778.2 |
| abc transporter substrate-binding protein | DI534_14765 | Not Available | Positive | 3098826 - 3100064 | 42316.7 |
| sugar abc transporter permease | DI534_14770 | Not Available | Positive | 3100120 - 3101247 | 40387.3 |
| abc transporter permease | DI534_14775 | Not Available | Positive | 3101244 - 3102101 | 30966.3 |
| dna-binding protein | DI534_14780 | Not Available | Negative | 3102180 - 3104225 | 73043.1 |
| hypothetical protein | DI534_14785 | Not Available | Positive | 3104312 - 3104962 | 22610.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
