Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI534_14690 | Not Available | Positive | 3075574 - 3077397 | 63195.2 |
| glyoxalase | DI534_14695 | Not Available | Negative | 3077469 - 3078311 | 30281.3 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | DI534_14700 | Not Available | Negative | 3078558 - 3079427 | 31859.8 |
| phosphoribosylamine--glycine ligase | DI534_14705 | Not Available | Negative | 3079457 - 3080725 | 43779.4 |
| hypothetical protein | DI534_14710 | Not Available | Positive | 3080788 - 3081150 | 12606.9 |
| hypothetical protein | DI534_14715 | Not Available | Positive | 3081195 - 3081521 | 11625.0 |
| hypothetical protein | DI534_14720 | Not Available | Positive | 3081558 - 3082556 | 35354.7 |
| hypothetical protein | DI534_14725 | Not Available | Positive | 3082829 - 3089062 | 214437.0 |
| amidophosphoribosyltransferase | DI534_14730 | Not Available | Negative | 3089139 - 3090596 | 53528.9 |
| hypothetical protein | DI534_14735 | Not Available | Positive | 3090636 - 3092843 | 74317.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
