Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| padr family transcriptional regulator | DI534_14640 | Not Available | Negative | 3068816 - 3069364 | 19676.5 |
| hypothetical protein | DI534_14645 | Not Available | Positive | 3069417 - 3069830 | 14090.7 |
| hypothetical protein | DI534_14650 | Not Available | Positive | 3069936 - 3070514 | 20512.7 |
| tetr family transcriptional regulator | DI534_14655 | Not Available | Negative | 3070533 - 3071162 | 22632.6 |
| mfs transporter | DI534_14660 | Not Available | Positive | 3071248 - 3072759 | 52170.4 |
| hypothetical protein | DI534_14665 | Not Available | Positive | 3072875 - 3073111 | 9017.48 |
| phosphoribosylformylglycinamidine synthase subunit purq | DI534_14670 | Not Available | Negative | 3073122 - 3073826 | 24708.3 |
| phosphoribosylformylglycinamidine synthase | DI534_14675 | Not Available | Negative | 3073826 - 3074071 | 8613.38 |
| nucleoside/nucleotide kinase family protein | DI534_14680 | Not Available | Negative | 3074109 - 3074888 | 27388.5 |
| hypothetical protein | DI534_14685 | Not Available | Negative | 3074731 - 3075597 | 32120.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
