Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator | DI534_14590 | Not Available | Negative | 3057352 - 3058101 | 27459.9 |
| sensor histidine kinase | DI534_14595 | Not Available | Negative | 3058098 - 3059300 | 42336.8 |
| duf485 domain-containing protein | DI534_14600 | Not Available | Positive | 3059476 - 3059826 | 12815.5 |
| cation acetate symporter | DI534_14605 | Not Available | Positive | 3059826 - 3061439 | 55626.0 |
| n-acetyltransferase | DI534_14610 | Not Available | Positive | 3061598 - 3062245 | 23613.8 |
| mfs transporter | DI534_14615 | Not Available | Negative | 3062221 - 3063864 | 56879.2 |
| chorismate mutase | DI534_14620 | Not Available | Positive | 3063908 - 3064231 | 11813.9 |
| hypothetical protein | DI534_14625 | Not Available | Positive | 3064228 - 3065151 | 32392.5 |
| phosphoribosylformylglycinamidine synthase subunit purl | DI534_14630 | Not Available | Negative | 3065354 - 3067645 | 81244.5 |
| hypothetical protein | DI534_14635 | Not Available | Negative | 3067778 - 3068686 | 33279.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
