Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI534_14540 | Not Available | Positive | 3046991 - 3048043 | 35652.5 |
| tigr01457 family had-type hydrolase | DI534_14545 | Not Available | Negative | 3048108 - 3048893 | 27932.3 |
| site-specific dna-methyltransferase | DI534_14550 | Not Available | Negative | 3049000 - 3049890 | 33130.9 |
| rrna methyltransferase | DI534_14555 | Not Available | Positive | 3049909 - 3050541 | 23429.6 |
| hypothetical protein | DI534_14560 | Not Available | Negative | 3050941 - 3052668 | 58814.0 |
| hypothetical protein | DI534_14565 | Not Available | Negative | 3052665 - 3053258 | 20869.1 |
| tetr family transcriptional regulator | DI534_14570 | Not Available | Negative | 3053255 - 3053893 | 22507.2 |
| adenylosuccinate synthase | DI534_14575 | Not Available | Positive | 3054093 - 3055376 | 46138.0 |
| cation acetate symporter | DI534_14580 | Not Available | Negative | 3055521 - 3056978 | 50176.4 |
| hypothetical protein | DI534_14585 | Not Available | Negative | 3056975 - 3057229 | 8835.13 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
