Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plasmid stabilization protein | DI534_14490 | Not Available | Positive | 3037089 - 3037361 | 10544.9 |
| 4-hydroxybenzoyl-coa thioesterase | DI534_14495 | Not Available | Positive | 3037526 - 3037978 | 17050.4 |
| hypothetical protein | DI534_14500 | Not Available | Positive | 3038078 - 3038500 | 14457.0 |
| hypothetical protein | DI534_14505 | Not Available | Negative | 3038553 - 3040193 | 57399.9 |
| hypothetical protein | DI534_14510 | Not Available | Negative | 3040219 - 3041166 | 32723.9 |
| aminoglycoside phosphotransferase | DI534_14515 | Not Available | Positive | 3042366 - 3043124 | 27000.8 |
| alpha/beta hydrolase | DI534_14520 | Not Available | Negative | 3043081 - 3043899 | 28587.3 |
| rida family protein | DI534_14525 | Not Available | Positive | 3044017 - 3044406 | 13066.8 |
| exodeoxyribonuclease iii | DI534_14530 | Not Available | Negative | 3044494 - 3045333 | 31216.8 |
| orotate phosphoribosyltransferase | DI534_14535 | Not Available | Positive | 3045458 - 3046012 | 19531.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
