Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI534_14375 | Not Available | Positive | 3017228 - 3017896 | 23768.8 |
| hypothetical protein | DI534_14380 | Not Available | Negative | 3018762 - 3019034 | 9868.8 |
| hypothetical protein | DI534_14385 | Not Available | Negative | 3019554 - 3019793 | 8160.67 |
| hypothetical protein | DI534_14390 | Not Available | Negative | 3019836 - 3020432 | 21318.9 |
| hypothetical protein | DI534_14395 | Not Available | Negative | 3020973 - 3021740 | 26189.6 |
| uroporphyrinogen decarboxylase | DI534_14400 | Not Available | Positive | 3023138 - 3024193 | 37509.4 |
| hypothetical protein | DI534_14405 | Not Available | Positive | 3024180 - 3025460 | 44440.7 |
| phage holin family protein | DI534_14415 | Not Available | Positive | 3025842 - 3026267 | 14988.0 |
| hypothetical protein | DI534_14420 | Not Available | Positive | 3026260 - 3026499 | 8220.67 |
| chlorite dismutase | DI534_14425 | Not Available | Positive | 3026576 - 3027241 | 24600.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
