Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter permease | DI534_14325 | Not Available | Negative | 3005165 - 3006010 | 30581.7 |
| sugar abc transporter permease | DI534_14330 | Not Available | Negative | 3006040 - 3006990 | 34528.8 |
| laci family transcriptional regulator | DI534_14335 | Not Available | Positive | 3007159 - 3008262 | 39390.8 |
| had family hydrolase | DI534_14340 | Not Available | Positive | 3008291 - 3009064 | 27850.1 |
| hypothetical protein | DI534_14345 | Not Available | Negative | 3009133 - 3013392 | 148269.0 |
| sugar abc transporter substrate-binding protein | DI534_14350 | Not Available | Negative | 3013497 - 3014792 | 45208.2 |
| hypothetical protein | DI534_14355 | Not Available | Positive | 3015061 - 3015408 | 11760.8 |
| c-type cytochrome biogenesis protein ccsb | DI534_14360 | Not Available | Positive | 3015505 - 3015689 | 6832.34 |
| hypothetical protein | DI534_14365 | Not Available | Negative | 3015869 - 3016375 | 18700.3 |
| hypothetical protein | DI534_14370 | Not Available | Negative | 3016379 - 3016648 | 9440.57 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
