Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aaa+ family atpase | DI534_14275 | Not Available | Negative | 2995534 - 2996790 | 45817.0 |
| glutathione-dependent formaldehyde dehydrogenase | DI534_14280 | Not Available | Positive | 2996952 - 2998127 | 41862.3 |
| llm class f420-dependent oxidoreductase | DI534_14285 | Not Available | Positive | 2998321 - 2999286 | 35181.3 |
| nad(p)h-hydrate dehydratase | DI534_14290 | Not Available | Negative | 2999306 - 3000190 | 29493.9 |
| histidine phosphatase family protein | DI534_14295 | Not Available | Negative | 3000174 - 3000914 | 26579.4 |
| dna starvation/stationary phase protection protein | DI534_14300 | Not Available | Negative | 3000929 - 3001477 | 19851.3 |
| hypothetical protein | DI534_14305 | Not Available | Negative | 3001474 - 3001677 | 7086.52 |
| abc transporter | DI534_14310 | Not Available | Negative | 3001740 - 3003422 | 61224.4 |
| padr family transcriptional regulator | DI534_14315 | Not Available | Negative | 3003427 - 3003867 | 15389.2 |
| glycosidase | DI534_14320 | Not Available | Negative | 3004016 - 3005116 | 39350.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
