Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system pemk/mazf family toxin | DI534_14225 | Not Available | Positive | 2989503 - 2989841 | 12606.1 |
| abc transporter permease | DI534_14230 | Not Available | Negative | 2989849 - 2990613 | 26657.1 |
| export abc transporter atp-binding protein | DI534_14235 | Not Available | Negative | 2990610 - 2991392 | 27220.9 |
| hypothetical protein | DI534_14240 | Not Available | Negative | 2991389 - 2991763 | 13782.2 |
| padr family transcriptional regulator | DI534_14245 | Not Available | Negative | 2991765 - 2992118 | 12918.4 |
| sulfite exporter taue/safe family protein | DI534_14250 | Not Available | Positive | 2992300 - 2993109 | 27103.9 |
| hypothetical protein | DI534_14255 | Not Available | Positive | 2993171 - 2993590 | 13855.0 |
| hypothetical protein | DI534_14260 | Not Available | Positive | 2993587 - 2994816 | 42803.4 |
| hypothetical protein | DI534_14265 | Not Available | Positive | 2994813 - 2995202 | 14189.8 |
| hypothetical protein | DI534_14270 | Not Available | Positive | 2995189 - 2995527 | 12528.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
