Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxylate--amine ligase | DI534_01350 | Not Available | Negative | 288447 - 289298 | 30918.6 |
| hydrolase | DI534_01355 | Not Available | Positive | 289409 - 290068 | 23473.0 |
| sam-dependent methyltransferase | DI534_01360 | Not Available | Positive | 290065 - 291063 | 35350.4 |
| hypothetical protein | DI534_01365 | Not Available | Positive | 291115 - 292107 | 33174.7 |
| wyl domain-containing protein | DI534_01370 | Not Available | Positive | 292159 - 293106 | 34752.6 |
| wyl domain-containing protein | DI534_01375 | Not Available | Positive | 293099 - 294097 | 36481.1 |
| twin-arginine translocase tata/tate family subunit | DI534_01380 | Not Available | Positive | 294133 - 294375 | 8697.35 |
| twin-arginine translocase subunit tatc | DI534_01385 | Not Available | Positive | 294435 - 295265 | 30078.5 |
| rna helicase | DI534_01390 | Not Available | Positive | 295262 - 297703 | 90696.0 |
| apolipoprotein n-acyltransferase | DI534_01395 | Not Available | Positive | 297737 - 299314 | 55964.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
