Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI534_14075 | Not Available | Positive | 2962203 - 2962505 | 11954.3 |
| fad-binding oxidoreductase | DI534_14080 | Not Available | Negative | 2962507 - 2964210 | 60480.9 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | DI534_14085 | Not Available | Negative | 2964207 - 2964962 | 26579.2 |
| short-chain dehydrogenase | DI534_14090 | Not Available | Negative | 2964972 - 2965742 | 27532.3 |
| vapc toxin family pin domain ribonuclease | DI534_14095 | Not Available | Negative | 2965780 - 2966148 | 13561.6 |
| hypothetical protein | DI534_14100 | Not Available | Negative | 2966148 - 2966417 | 10534.7 |
| hypothetical protein | DI534_14105 | Not Available | Positive | 2966589 - 2967395 | 28702.2 |
| had-ib family hydrolase | DI534_14110 | Not Available | Positive | 2967392 - 2969704 | 84336.9 |
| hypothetical protein | DI534_14115 | Not Available | Positive | 2969721 - 2970515 | 29644.4 |
| hypothetical protein | DI534_14120 | Not Available | Positive | 2970512 - 2971195 | 24784.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
