Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI534_13875 | Not Available | Negative | 2926652 - 2927353 | 24979.6 |
| nadp-specific glutamate dehydrogenase | DI534_13880 | Not Available | Negative | 2927355 - 2928698 | 48278.9 |
| nad+ synthase | DI534_13885 | Not Available | Negative | 2928750 - 2930483 | 62147.0 |
| glutamine synthetase | DI534_13890 | Not Available | Positive | 2930531 - 2931868 | 49157.2 |
| bifunctional | DI534_13895 | Not Available | Positive | 2931865 - 2934780 | 107087.0 |
| hypothetical protein | DI534_13900 | Not Available | Negative | 2934850 - 2936328 | 44629.9 |
| dna-binding protein | DI534_13905 | Not Available | Positive | 2936643 - 2936867 | 8368.85 |
| hypothetical protein | DI534_13910 | Not Available | Positive | 2936867 - 2937752 | 32733.4 |
| c-type cytochrome biogenesis protein ccsb | DI534_13915 | Not Available | Negative | 2937753 - 2938578 | 29065.6 |
| cytochrome c biogenesis protein | DI534_13920 | Not Available | Negative | 2938575 - 2940218 | 59005.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
