Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI534_13820 | Not Available | Positive | 2916802 - 2917500 | 24784.2 |
| eama family transporter | DI534_13825 | Not Available | Positive | 2917440 - 2918429 | 33063.1 |
| hypothetical protein | DI534_13830 | Not Available | Positive | 2918426 - 2921383 | 98632.4 |
| nif3-like dinuclear metal center hexameric protein | DI534_13835 | Not Available | Positive | 2921439 - 2922206 | 26556.7 |
| hypothetical protein | DI534_13840 | Not Available | Positive | 2922270 - 2923010 | 26360.1 |
| cold-shock protein | DI534_13850 | Not Available | Negative | 2923505 - 2923708 | 7392.59 |
| polyphosphate glucokinase | DI534_13855 | Not Available | Negative | 2923827 - 2924585 | 26359.3 |
| type i methionyl aminopeptidase | DI534_13860 | Not Available | Negative | 2924602 - 2925486 | 31565.3 |
| methionine aminopeptidase | DI534_13865 | Not Available | Positive | 2925519 - 2925689 | 6292.91 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | DI534_13870 | Not Available | Negative | 2925827 - 2926642 | 29113.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
