Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3145 domain-containing protein | DI534_13770 | Not Available | Positive | 2907166 - 2907645 | 17760.7 |
| beta-ketoacyl-acp synthase | DI534_13775 | Not Available | Negative | 2907868 - 2909103 | 42920.8 |
| acyl carrier protein | DI534_13780 | Not Available | Negative | 2909198 - 2909446 | 8793.31 |
| 3-oxoacyl-acp synthase | DI534_13785 | Not Available | Negative | 2909487 - 2910488 | 35187.0 |
| acp s-malonyltransferase | DI534_13790 | Not Available | Negative | 2910485 - 2911411 | 30945.1 |
| pucr family transcriptional regulator | DI534_13795 | Not Available | Negative | 2911488 - 2912672 | 43063.7 |
| pyruvate dehydrogenase (acetyl-transferring), homodimeric type | DI534_13800 | Not Available | Negative | 2912686 - 2915412 | 100852.0 |
| peroxiredoxin | DI534_13805 | Not Available | Positive | 2915535 - 2916008 | 17492.7 |
| hypothetical protein | DI534_13810 | Not Available | Negative | 2916022 - 2916726 | 25613.4 |
| Trna-val | Not Available | Not Available | Positive | 2916759 - 2916834 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
