Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI534_13720 | Not Available | Positive | 2895395 - 2896729 | 45799.1 |
| Trna-met | Not Available | Not Available | Positive | 2896739 - 2896815 | Not Available |
| hypothetical protein | DI534_13730 | Not Available | Positive | 2896958 - 2897677 | 25061.5 |
| hypothetical protein | DI534_13735 | Not Available | Positive | 2897835 - 2898506 | 24665.4 |
| hypothetical protein | DI534_13740 | Not Available | Negative | 2898503 - 2899351 | 30698.0 |
| nrdh-redoxin | DI534_13745 | Not Available | Negative | 2899789 - 2900022 | 8425.8 |
| hypothetical protein | DI534_13750 | Not Available | Negative | 2900109 - 2903819 | 127336.0 |
| duf1684 domain-containing protein | DI534_13755 | Not Available | Positive | 2903960 - 2904820 | 30799.8 |
| hypothetical protein | DI534_13760 | Not Available | Negative | 2904859 - 2905299 | 15772.1 |
| bifunctional 3'-5' exonuclease/dna polymerase | DI534_13765 | Not Available | Positive | 2905336 - 2907024 | 60559.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
