Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| long-chain fatty acid--coa ligase | DI534_13670 | Not Available | Negative | 2883402 - 2885225 | 64877.8 |
| glucokinase | DI534_13675 | Not Available | Positive | 2885350 - 2886306 | 32762.1 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | DI534_13680 | Not Available | Positive | 2886353 - 2887048 | 25516.1 |
| 3-deoxy-7-phosphoheptulonate synthase class ii | DI534_13685 | Not Available | Positive | 2887153 - 2888523 | 50416.8 |
| stk1 family pasta domain-containing ser/thr kinase | DI534_13690 | Not Available | Negative | 2888609 - 2890546 | 68265.5 |
| peptidoglycan-binding protein lysm | DI534_13695 | Not Available | Negative | 2890621 - 2891829 | 40975.8 |
| dna-binding protein | DI534_13700 | Not Available | Positive | 2892145 - 2892483 | 12251.8 |
| peptide deformylase | DI534_13705 | Not Available | Negative | 2892571 - 2893137 | 20814.9 |
| multidrug dmt transporter permease | DI534_13710 | Not Available | Positive | 2893217 - 2894131 | 31777.8 |
| glucosyl transferase | DI534_13715 | Not Available | Positive | 2894100 - 2895398 | 47895.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
