Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyprenyl glycosylphosphotransferase | DI534_13620 | Not Available | Negative | 2871942 - 2873471 | 55593.2 |
| hypothetical protein | DI534_13625 | Not Available | Negative | 2873824 - 2874645 | 30647.4 |
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | DI534_13630 | Not Available | Positive | 2874690 - 2875292 | 21590.7 |
| transcriptional regulator | DI534_13635 | Not Available | Positive | 2875304 - 2875807 | 17805.5 |
| merr family transcriptional regulator | DI534_13640 | Not Available | Positive | 2875807 - 2876499 | 25080.4 |
| merr family transcriptional regulator | DI534_13645 | Not Available | Positive | 2876657 - 2877217 | 20060.7 |
| chromosome partitioning protein para | DI534_13650 | Not Available | Negative | 2877262 - 2878086 | 29366.4 |
| pyruvate carboxylase | DI534_13655 | Not Available | Positive | 2878165 - 2881563 | 121704.0 |
| hypothetical protein | DI534_13660 | Not Available | Positive | 2881574 - 2882884 | 46926.4 |
| peptide deformylase | DI534_13665 | Not Available | Positive | 2882891 - 2883388 | 18055.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
