Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI534_13570 | Not Available | Positive | 2856993 - 2861663 | 158047.0 |
| hypothetical protein | DI534_13575 | Not Available | Positive | 2861735 - 2863000 | 44247.2 |
| hypothetical protein | DI534_13580 | Not Available | Negative | 2862962 - 2864296 | 46788.7 |
| capsular biosynthesis protein | DI534_13585 | Not Available | Positive | 2864326 - 2865819 | 52801.6 |
| hypothetical protein | DI534_13590 | Not Available | Negative | 2865850 - 2866818 | 34825.1 |
| glycosyl transferase | DI534_13595 | Not Available | Positive | 2866906 - 2868078 | 43231.1 |
| oxidoreductase | DI534_13600 | Not Available | Positive | 2868075 - 2869166 | 39538.1 |
| hypothetical protein | DI534_13605 | Not Available | Positive | 2869166 - 2870029 | 31716.3 |
| hypothetical protein | DI534_13610 | Not Available | Negative | 2870038 - 2871150 | 40512.4 |
| cdp-alcohol phosphatidyltransferase | DI534_13615 | Not Available | Negative | 2871154 - 2871942 | 27895.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
