Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nudix hydrolase | DI534_13520 | Not Available | Positive | 2849463 - 2849972 | 18262.4 |
| hypothetical protein | DI534_13525 | Not Available | Negative | 2849980 - 2850468 | 17488.5 |
| hypothetical protein | DI534_13530 | Not Available | Negative | 2850582 - 2850806 | 8512.26 |
| cytidyltransferase | DI534_13535 | Not Available | Negative | 2850932 - 2851387 | 16730.0 |
| hypothetical protein | DI534_13540 | Not Available | Negative | 2851441 - 2852481 | 36995.2 |
| hypothetical protein | DI534_13545 | Not Available | Positive | 2852558 - 2853202 | 22639.1 |
| glycosyl transferase family 2 | DI534_13550 | Not Available | Negative | 2853215 - 2854210 | 35702.9 |
| glycosyl transferase | DI534_13555 | Not Available | Negative | 2854135 - 2855091 | 35324.4 |
| glycosyltransferase family 2 protein | DI534_13560 | Not Available | Positive | 2855030 - 2856205 | 42041.8 |
| hypothetical protein | DI534_13565 | Not Available | Positive | 2856337 - 2856963 | 20419.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
