Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI534_13415 | Not Available | Positive | 2825053 - 2825583 | 19962.7 |
| hypothetical protein | DI534_13420 | Not Available | Positive | 2825735 - 2826106 | 13936.5 |
| hypothetical protein | DI534_13425 | Not Available | Positive | 2826241 - 2826441 | 7431.87 |
| type i restriction-modification system subunit m | DI534_13430 | Not Available | Positive | 2826656 - 2828221 | 58158.4 |
| restriction endonuclease | DI534_13435 | Not Available | Positive | 2828218 - 2829471 | 45977.5 |
| dead/deah box helicase | DI534_13440 | Not Available | Positive | 2829468 - 2832572 | 116993.0 |
| hypothetical protein | DI534_13445 | Not Available | Positive | 2832575 - 2835415 | 104414.0 |
| hypothetical protein | DI534_13450 | Not Available | Negative | 2835423 - 2835890 | 16996.4 |
| hypothetical protein | DI534_13460 | Not Available | Positive | 2837334 - 2838104 | 27543.5 |
| tigr02391 family protein | DI534_13465 | Not Available | Positive | 2838101 - 2838619 | 19239.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
