Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI534_13365 | Not Available | Negative | 2819548 - 2819748 | 7752.82 |
| methyltransferase | DI534_13370 | Not Available | Negative | 2819748 - 2820362 | 22632.9 |
| hypothetical protein | DI534_13375 | Not Available | Negative | 2820558 - 2820839 | 10404.2 |
| hypothetical protein | DI534_13380 | Not Available | Negative | 2820839 - 2821147 | 11135.3 |
| hypothetical protein | DI534_13385 | Not Available | Positive | 2821252 - 2821986 | 27783.0 |
| hypothetical protein | DI534_13390 | Not Available | Positive | 2822734 - 2822976 | 9436.32 |
| hypothetical protein | DI534_13395 | Not Available | Positive | 2823073 - 2823657 | 21931.1 |
| hypothetical protein | DI534_13400 | Not Available | Positive | 2823651 - 2824199 | 20708.7 |
| dna-binding protein | DI534_13405 | Not Available | Positive | 2824368 - 2824688 | 11346.4 |
| hypothetical protein | DI534_13410 | Not Available | Negative | 2824769 - 2824966 | 7752.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
