Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | DI534_13315 | Not Available | Positive | 2809095 - 2810093 | 34466.7 |
| hnh endonuclease | DI534_13320 | Not Available | Negative | 2810216 - 2811520 | 47364.1 |
| adenine phosphoribosyltransferase | DI534_13325 | Not Available | Negative | 2811590 - 2812114 | 17943.6 |
| hypothetical protein | DI534_13330 | Not Available | Negative | 2812149 - 2812580 | 15462.0 |
| Trna-pro | Not Available | Not Available | Positive | 2812700 - 2812773 | Not Available |
| recombinase family protein | DI534_13340 | Not Available | Negative | 2812771 - 2814654 | 70639.0 |
| hypothetical protein | DI534_13345 | Not Available | Negative | 2814825 - 2815649 | 30774.8 |
| hypothetical protein | DI534_13350 | Not Available | Negative | 2815646 - 2816005 | 12937.3 |
| hypothetical protein | DI534_13355 | Not Available | Negative | 2816002 - 2817426 | 52330.2 |
| hypothetical protein | DI534_13360 | Not Available | Negative | 2819145 - 2819345 | 7693.97 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
