Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chromosome partitioning protein | DI534_13265 | Not Available | Positive | 2799450 - 2800343 | 31774.2 |
| segregation/condensation protein a | DI534_13270 | Not Available | Positive | 2800375 - 2801202 | 30667.6 |
| smc-scp complex subunit scpb | DI534_13275 | Not Available | Positive | 2801192 - 2801794 | 21488.6 |
| mfs transporter | DI534_13280 | Not Available | Positive | 2801791 - 2802603 | 29174.1 |
| prephenate dehydrogenase | DI534_13285 | Not Available | Positive | 2802600 - 2803691 | 37999.6 |
| (d)cmp kinase | DI534_13290 | Not Available | Positive | 2803688 - 2804389 | 24553.9 |
| ribosome biogenesis gtpase der | DI534_13295 | Not Available | Positive | 2804401 - 2805939 | 56253.9 |
| mfs transporter | DI534_13300 | Not Available | Negative | 2805917 - 2807443 | 51899.9 |
| tetr family transcriptional regulator | DI534_13305 | Not Available | Positive | 2807513 - 2808094 | 21538.1 |
| l-lactate dehydrogenase | DI534_13310 | Not Available | Positive | 2808145 - 2809098 | 33001.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
