Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2207 domain-containing protein | DI534_13195 | Not Available | Negative | 2782036 - 2783907 | 66297.2 |
| tyrosine--trna ligase | DI534_13200 | Not Available | Positive | 2783946 - 2785253 | 46744.5 |
| hypothetical protein | DI534_13225 | Not Available | Positive | 2790592 - 2791305 | 25691.1 |
| haloacid dehalogenase | DI534_13230 | Not Available | Positive | 2791302 - 2792336 | 35672.4 |
| tlya family rrna (cytidine-2'-o)-methyltransferase | DI534_13235 | Not Available | Positive | 2792489 - 2793313 | 28701.1 |
| nad kinase | DI534_13240 | Not Available | Positive | 2793376 - 2794317 | 33177.9 |
| dna repair protein recn | DI534_13245 | Not Available | Positive | 2794314 - 2796014 | 59211.9 |
| ctp synthase | DI534_13250 | Not Available | Positive | 2796071 - 2797837 | 63574.4 |
| adp-ribose pyrophosphatase | DI534_13255 | Not Available | Positive | 2797764 - 2798432 | 24927.6 |
| site-specific tyrosine recombinase xerd | DI534_13260 | Not Available | Positive | 2798419 - 2799342 | 33212.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
