Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mannosyltransferase | DI534_01250 | Not Available | Positive | 265705 - 266799 | 40975.6 |
| histidine phosphatase family protein | DI534_01255 | Not Available | Negative | 266796 - 267422 | 22879.8 |
| nad-dependent protein deacetylase | DI534_01260 | Not Available | Negative | 267463 - 268323 | 30387.5 |
| rrna methyltransferase | DI534_01265 | Not Available | Positive | 268399 - 269205 | 28908.2 |
| amino acid transporter | DI534_01270 | Not Available | Positive | 269243 - 270772 | 54073.4 |
| d-alanyl-d-alanine carboxypeptidase | DI534_01275 | Not Available | Positive | 270836 - 272071 | 42608.9 |
| sgnh hydrolase | DI534_01280 | Not Available | Negative | 272129 - 272911 | 28790.2 |
| glsb/yeaq/ymge family stress response membrane protein | DI534_01285 | Not Available | Positive | 273039 - 273302 | 9170.82 |
| dna polymerase iv | DI534_01290 | Not Available | Positive | 273392 - 274633 | 45277.2 |
| hypothetical protein | DI534_01295 | Not Available | Positive | 274809 - 276611 | 66322.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
