Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2252 domain-containing protein | DI534_13140 | Not Available | Positive | 2770673 - 2772115 | 52880.4 |
| n-acetyl-gamma-glutamyl-phosphate reductase | DI534_13145 | Not Available | Positive | 2772333 - 2773382 | 35448.1 |
| bifunctional ornithine acetyltransferase/n-acetylglutamate synthase | DI534_13150 | Not Available | Positive | 2773379 - 2774530 | 39290.3 |
| acetylglutamate kinase | DI534_13155 | Not Available | Positive | 2774527 - 2775426 | 31420.2 |
| acetylornithine transaminase | DI534_13160 | Not Available | Positive | 2775423 - 2776658 | 42698.1 |
| ornithine carbamoyltransferase | DI534_13165 | Not Available | Positive | 2776655 - 2777584 | 32913.9 |
| argininosuccinate lyase | DI534_13175 | Not Available | Positive | 2778538 - 2780001 | 52294.4 |
| dna-3-methyladenine glycosylase | DI534_13180 | Not Available | Positive | 2780165 - 2780770 | 21122.3 |
| hypothetical protein | DI534_13185 | Not Available | Negative | 2780754 - 2781326 | 19795.0 |
| dna-binding protein | DI534_13190 | Not Available | Negative | 2781336 - 2781956 | 21243.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
