Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin | DI534_12935 | Not Available | Negative | 2730312 - 2730737 | 14704.8 |
| fad-dependent thymidylate synthase | DI534_12940 | Not Available | Positive | 2730852 - 2731598 | 27743.8 |
| cardiolipin synthase | DI534_12945 | Not Available | Negative | 2731617 - 2733074 | 54219.4 |
| ai-2e family transporter | DI534_12950 | Not Available | Negative | 2733071 - 2734129 | 36811.9 |
| 4-hydroxy-tetrahydrodipicolinate synthase | DI534_12955 | Not Available | Positive | 2734220 - 2735197 | 34467.3 |
| rnase j family beta-casp ribonuclease | DI534_12960 | Not Available | Positive | 2735214 - 2736890 | 60364.0 |
| hypothetical protein | DI534_12965 | Not Available | Positive | 2737098 - 2738063 | 31928.0 |
| abc transporter atp-binding protein | DI534_12970 | Not Available | Positive | 2738066 - 2738791 | 26180.6 |
| abc transporter permease | DI534_12975 | Not Available | Positive | 2738788 - 2740020 | 43821.6 |
| cell division protein ftsk | DI534_12980 | Not Available | Positive | 2740178 - 2742931 | 97162.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
