Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | DI534_12885 | Not Available | Negative | 2722711 - 2723313 | 22167.4 |
| peptidase m16 | DI534_12890 | Not Available | Positive | 2723616 - 2724971 | 48245.0 |
| histidine phosphatase family protein | DI534_12895 | Not Available | Positive | 2724985 - 2725587 | 22296.6 |
| mfs transporter | DI534_12900 | Not Available | Negative | 2725623 - 2726825 | 41431.9 |
| tetr family transcriptional regulator | DI534_12905 | Not Available | Positive | 2726949 - 2727560 | 22653.8 |
| padr family transcriptional regulator | DI534_12910 | Not Available | Negative | 2727562 - 2728023 | 16819.8 |
| 4-hydroxy-tetrahydrodipicolinate reductase | DI534_12915 | Not Available | Positive | 2728050 - 2728790 | 25328.5 |
| hypothetical protein | DI534_12920 | Not Available | Positive | 2728787 - 2729233 | 16006.6 |
| peroxiredoxin | DI534_12925 | Not Available | Negative | 2729322 - 2729747 | 14361.9 |
| duf4395 domain-containing protein | DI534_12930 | Not Available | Negative | 2729809 - 2730297 | 16974.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
