Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s15 | DI534_12830 | Not Available | Positive | 2709631 - 2709900 | 10373.6 |
| hypothetical protein | DI534_12835 | Not Available | Positive | 2710213 - 2710641 | 15939.1 |
| thioredoxin | DI534_12840 | Not Available | Negative | 2710675 - 2711049 | 13334.7 |
| nadph-dependent fmn reductase | DI534_12850 | Not Available | Positive | 2712321 - 2712962 | 22419.7 |
| hypothetical protein | DI534_12855 | Not Available | Positive | 2713090 - 2714760 | 58191.5 |
| hypothetical protein | DI534_12860 | Not Available | Negative | 2714786 - 2715559 | 27627.7 |
| glycosyl transferase | DI534_12865 | Not Available | Positive | 2715723 - 2717705 | 70896.1 |
| lipase | DI534_12870 | Not Available | Positive | 2717756 - 2718937 | 40414.5 |
| polyribonucleotide nucleotidyltransferase | DI534_12875 | Not Available | Positive | 2719255 - 2721534 | 80834.5 |
| alcohol dehydrogenase | DI534_12880 | Not Available | Positive | 2721696 - 2722706 | 35557.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
