Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3099 domain-containing protein | DI534_01200 | Not Available | Negative | 255944 - 256165 | 7725.76 |
| beta-ketoacyl-acp reductase | DI534_01205 | Not Available | Positive | 256278 - 256985 | 24419.2 |
| phosphoserine phosphatase serb | DI534_01210 | Not Available | Negative | 257023 - 257655 | 22142.7 |
| glucose-1-phosphate adenylyltransferase | DI534_01215 | Not Available | Negative | 257711 - 258952 | 44551.0 |
| glycogen synthase | DI534_01220 | Not Available | Positive | 259000 - 260205 | 42814.2 |
| abc transporter atp-binding protein | DI534_01225 | Not Available | Positive | 260218 - 261009 | 28985.6 |
| type b 50s ribosomal protein l31 | DI534_01230 | Not Available | Positive | 261092 - 261340 | 9266.87 |
| hypothetical protein | DI534_01235 | Not Available | Negative | 261526 - 262968 | 51929.4 |
| maltose alpha-d-glucosyltransferase | DI534_01240 | Not Available | Negative | 263001 - 264728 | 65831.3 |
| alpha/beta hydrolase | DI534_01245 | Not Available | Positive | 264779 - 265708 | 32899.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
